Record Information
Version1.0
Creation Date2016-05-27 01:54:15 UTC
Update Date2016-11-09 01:22:37 UTC
Accession NumberCHEM042194
Identification
Common NameD-threo-isocitrate
ClassSmall Molecule
DescriptionPropan-1-ol with a hydrogen at each of the 3 carbon positions substituted with a carboxylate group.
Contaminant Sources
  • FooDB Chemicals
Contaminant TypeNot Available
Chemical Structure
Thumb
Synonyms
ValueSource
1-HydroxytricarballylateChEBI
1-Hydroxytricarballylic acidGenerator
Isocitric acid(3-)Generator
Isocitric acidGenerator, MeSH
IsocitrateChEBI
D-Threo-isocitric acidGenerator
Isocitric acid, disodium saltMeSH
Isocitric acid, trisodium saltMeSH
Isocitric acid, calcium saltMeSH
Isocitric acid, sodium saltMeSH
Isocitric acid, (11)C-labeledMeSH
Isocitric acid, potassium saltMeSH
Chemical FormulaC6H5O7
Average Molecular Mass189.100 g/mol
Monoisotopic Mass189.004 g/mol
CAS Registry NumberNot Available
IUPAC Name1-hydroxypropane-1,2,3-tricarboxylate
Traditional Nameisocitrate
SMILESOC(C(CC([O-])=O)C([O-])=O)C([O-])=O
InChI IdentifierInChI=1S/C6H8O7/c7-3(8)1-2(5(10)11)4(9)6(12)13/h2,4,9H,1H2,(H,7,8)(H,10,11)(H,12,13)/p-3
InChI KeyODBLHEXUDAPZAU-UHFFFAOYSA-K
Chemical Taxonomy
Description belongs to the class of organic compounds known as tricarboxylic acids and derivatives. These are carboxylic acids containing exactly three carboxyl groups.
KingdomOrganic compounds
Super ClassOrganic acids and derivatives
ClassCarboxylic acids and derivatives
Sub ClassTricarboxylic acids and derivatives
Direct ParentTricarboxylic acids and derivatives
Alternative Parents
Substituents
  • Tricarboxylic acid or derivatives
  • Beta-hydroxy acid
  • Monosaccharide
  • Hydroxy acid
  • Secondary alcohol
  • Carboxylic acid
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Carbonyl group
  • Alcohol
  • Organic anion
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External Descriptors
Biological Properties
StatusDetected and Not Quantified
OriginNot Available
Cellular LocationsNot Available
Biofluid LocationsNot Available
Tissue LocationsNot Available
PathwaysNot Available
ApplicationsNot Available
Biological RolesNot Available
Chemical RolesNot Available
Physical Properties
StateNot Available
AppearanceNot Available
Experimental Properties
PropertyValue
Melting PointNot Available
Boiling PointNot Available
SolubilityNot Available
Predicted Properties
PropertyValueSource
Water Solubility133 g/LALOGPS
logP-0.72ALOGPS
logP-1.4ChemAxon
logS-0.26ALOGPS
pKa (Strongest Acidic)3.07ChemAxon
pKa (Strongest Basic)-4ChemAxon
Physiological Charge-3ChemAxon
Hydrogen Acceptor Count7ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area140.62 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity68.23 m³·mol⁻¹ChemAxon
Polarizability14.3 ųChemAxon
Number of Rings0ChemAxon
Bioavailability1ChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Spectra
Spectra
Spectrum TypeDescriptionSplash KeyView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 10V, Positivesplash10-0006-0900000000-6c8c6fab8c66de2ae6c9Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 20V, Positivesplash10-01q9-2900000000-039ad06f198790eca7e5Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 40V, Positivesplash10-06si-3900000000-11d9e778d4bb77771523Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 10V, Negativesplash10-000i-0900000000-91a9dfd5a22aa22c406eSpectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 20V, Negativesplash10-000i-1900000000-38830be7725758271cbcSpectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 40V, Negativesplash10-0zi0-9600000000-34909727d82df54c231bSpectrum
Toxicity Profile
Route of ExposureNot Available
Mechanism of ToxicityNot Available
MetabolismNot Available
Toxicity ValuesNot Available
Lethal DoseNot Available
Carcinogenicity (IARC Classification)Not Available
Uses/SourcesNot Available
Minimum Risk LevelNot Available
Health EffectsNot Available
SymptomsNot Available
TreatmentNot Available
Concentrations
Not Available
DrugBank IDNot Available
HMDB IDHMDB0304324
FooDB IDFDB030800
Phenol Explorer IDNot Available
KNApSAcK IDNot Available
BiGG IDNot Available
BioCyc IDIsocitrate
METLIN IDNot Available
PDB IDNot Available
Wikipedia LinkNot Available
Chemspider ID4573809
ChEBI ID16087
PubChem Compound IDNot Available
Kegg Compound IDNot Available
YMDB IDYMDB01013
ECMDB IDNot Available
References
Synthesis ReferenceNot Available
MSDSNot Available
General ReferencesNot Available