Isolithocholic acid (CHEM022836)

IdentificationTaxonomyBiological PropertiesPhysical PropertiesToxicity ProfileSpectraConcentrationsLinksReferencesXML
Record Information
Version1.0
Creation Date2016-05-25 18:56:04 UTC
Update Date2016-11-09 01:17:35 UTC
Accession NumberCHEM022836
Identification
Common NameIsolithocholic acid
ClassSmall Molecule
DescriptionA monohydroxy-5beta-cholanic acid with a beta-hydroxy substituent at position 3. The 3beta-hydroxy epimer of lithocholic acid.
Contaminant Sources
  • FooDB Chemicals
  • HMDB Contaminants - Feces
Contaminant TypeNot Available
Chemical Structure
Thumb
MOLSDF3D-SDFPDBSMILESInChI View 3D Structure
Synonyms
ValueSource
(3beta,5beta)-3-Hydroxycholan-24-Oic acidChEBI
3-Epilithocholic acidChEBI
3beta-Hydroxy-5beta-cholan-24-Oic acidChEBI
3beta-Lithocholic acidChEBI
beta-Lithocholanic acidChEBI
beta-Lithocholic acidChEBI
(3b,5b)-3-Hydroxycholan-24-OateGenerator
(3b,5b)-3-Hydroxycholan-24-Oic acidGenerator
(3beta,5beta)-3-Hydroxycholan-24-OateGenerator
(3Β,5β)-3-hydroxycholan-24-OateGenerator
(3Β,5β)-3-hydroxycholan-24-Oic acidGenerator
3-EpilithocholateGenerator
3b-Hydroxy-5b-cholan-24-OateGenerator
3b-Hydroxy-5b-cholan-24-Oic acidGenerator
3beta-Hydroxy-5beta-cholan-24-OateGenerator
3Β-hydroxy-5β-cholan-24-OateGenerator
3Β-hydroxy-5β-cholan-24-Oic acidGenerator
3b-LithocholateGenerator
3b-Lithocholic acidGenerator
3beta-LithocholateGenerator
3Β-lithocholateGenerator
3Β-lithocholic acidGenerator
b-LithocholanateGenerator
b-Lithocholanic acidGenerator
beta-LithocholanateGenerator
Β-lithocholanateGenerator
Β-lithocholanic acidGenerator
b-LithocholateGenerator
b-Lithocholic acidGenerator
beta-LithocholateGenerator
Β-lithocholateGenerator
Β-lithocholic acidGenerator
IsolithocholateGenerator
3b-Hydroxy-5b-cholanateHMDB
3b-Hydroxy-5b-cholanic acidHMDB
3b-Hydroxy-5b-cholanoateHMDB
3b-Hydroxy-5b-cholanoic acidHMDB
5b-Cholanic acid-3b-olHMDB
Acid, isolithocholicHMDB
Acid, lithocholicHMDB
LithocholateHMDB
Lithocholic acidHMDB
Chemical FormulaC24H40O3
Average Molecular Mass376.573 g/mol
Monoisotopic Mass376.298 g/mol
CAS Registry Number1534-35-6
IUPAC Name(4R)-4-[(1S,2S,5S,7R,10R,11S,14R,15R)-5-hydroxy-2,15-dimethyltetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadecan-14-yl]pentanoic acid
Traditional Name(4R)-4-[(1S,2S,5S,7R,10R,11S,14R,15R)-5-hydroxy-2,15-dimethyltetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadecan-14-yl]pentanoic acid
SMILES[H][C@@]12CC[C@H]([C@H](C)CCC(O)=O)[C@@]1(C)CC[C@@]1([H])[C@@]2([H])CC[C@]2([H])C[C@@H](O)CC[C@]12C
InChI IdentifierInChI=1S/C24H40O3/c1-15(4-9-22(26)27)19-7-8-20-18-6-5-16-14-17(25)10-12-23(16,2)21(18)11-13-24(19,20)3/h15-21,25H,4-14H2,1-3H3,(H,26,27)/t15-,16-,17+,18+,19-,20+,21+,23+,24-/m1/s1
InChI KeySMEROWZSTRWXGI-WFVDQZAMSA-N
Chemical Taxonomy
Description belongs to the class of organic compounds known as monohydroxy bile acids, alcohols and derivatives. These are bile acids, alcohols or any of their derivatives bearing a hydroxyl group.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassSteroids and steroid derivatives
Sub ClassBile acids, alcohols and derivatives
Direct ParentMonohydroxy bile acids, alcohols and derivatives
Alternative Parents
Substituents
  • Monohydroxy bile acid, alcohol, or derivatives
  • 3-hydroxysteroid
  • Hydroxysteroid
  • 3-beta-hydroxysteroid
  • Cyclic alcohol
  • Secondary alcohol
  • Carboxylic acid derivative
  • Carboxylic acid
  • Monocarboxylic acid or derivatives
  • Organic oxide
  • Alcohol
  • Organic oxygen compound
  • Carbonyl group
  • Hydrocarbon derivative
  • Organooxygen compound
  • Aliphatic homopolycyclic compound
Molecular FrameworkAliphatic homopolycyclic compounds
External Descriptors
Biological Properties
StatusDetected and Not Quantified
OriginNot Available
Cellular LocationsNot Available
Biofluid LocationsNot Available
Tissue LocationsNot Available
PathwaysNot Available
ApplicationsNot Available
Biological RolesNot Available
Chemical RolesNot Available
Physical Properties
StateNot Available
AppearanceNot Available
Experimental Properties
PropertyValue
Melting PointNot Available
Boiling PointNot Available
SolubilityNot Available
Predicted Properties
PropertyValueSource
Water Solubility0.0005 g/LALOGPS
logP4.38ALOGPS
logP5.02ChemAxon
logS-5.9ALOGPS
pKa (Strongest Acidic)4.79ChemAxon
pKa (Strongest Basic)-1.4ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count3ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area57.53 ŲChemAxon
Rotatable Bond Count4ChemAxon
Refractivity107.68 m³·mol⁻¹ChemAxon
Polarizability45.89 ųChemAxon
Number of Rings4ChemAxon
Bioavailability1ChemAxon
Rule of FiveNoChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Spectra
Spectra
Spectrum TypeDescriptionSplash KeyView
Predicted GC-MSPredicted GC-MS Spectrum - GC-MS (Non-derivatized) - 70eV, Positivesplash10-0hft-0109000000-d80c67969566eb069712Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - GC-MS (2 TMS) - 70eV, Positivesplash10-0a4i-3214890000-a148637510771fd69f57Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - GC-MS (Non-derivatized) - 70eV, PositiveNot AvailableSpectrum
Predicted GC-MSPredicted GC-MS Spectrum - GC-MS (TMS_1_1) - 70eV, PositiveNot AvailableSpectrum
Predicted GC-MSPredicted GC-MS Spectrum - GC-MS (TMS_1_2) - 70eV, PositiveNot AvailableSpectrum
Predicted GC-MSPredicted GC-MS Spectrum - GC-MS (TBDMS_1_1) - 70eV, PositiveNot AvailableSpectrum
Predicted GC-MSPredicted GC-MS Spectrum - GC-MS (TBDMS_1_2) - 70eV, PositiveNot AvailableSpectrum
Predicted GC-MSPredicted GC-MS Spectrum - GC-MS (TBDMS_2_1) - 70eV, PositiveNot AvailableSpectrum
LC-MS/MSLC-MS/MS Spectrum - 10V, Positivesplash10-0a4i-0129000000-066ac41ad9941f9e21f4Spectrum
LC-MS/MSLC-MS/MS Spectrum - 20V, Positivesplash10-00dl-0249000000-cce770467236fef9c102Spectrum
LC-MS/MSLC-MS/MS Spectrum - 40V, Positivesplash10-001m-9610000000-9bf43cf0de56ef3b9157Spectrum
LC-MS/MSLC-MS/MS Spectrum - 20V, Positivesplash10-00dl-0249000000-319218499f72e4ee3f1fSpectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 10V, Positivesplash10-0a6r-0009000000-f631439c42560b6112dcSpectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 20V, Positivesplash10-0bu3-0029000000-77d9dd354e5acfcbb059Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 40V, Positivesplash10-0002-1195000000-4e93d1691883a980ad09Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 10V, Negativesplash10-004i-0009000000-bc8a31ce5625ab01cbf9Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 20V, Negativesplash10-056r-1009000000-703fb777c311a25b0d15Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 40V, Negativesplash10-0a4l-9006000000-6c71a6df88d4f84121d0Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 10V, Negativesplash10-004i-0009000000-eccc9e9b8c78169f5313Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 20V, Negativesplash10-056r-0009000000-7777c272612ec6c534f1Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 40V, Negativesplash10-05di-3019000000-e5596a2bcefec4be517aSpectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 10V, Positivesplash10-004l-0009000000-4fc9c94a2a74d03b596dSpectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 20V, Positivesplash10-0a4i-6579000000-8d70683d9c59bbc7c41eSpectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 40V, Positivesplash10-0a4j-8970000000-50834929c8da38b179bfSpectrum
Toxicity Profile
Route of ExposureNot Available
Mechanism of ToxicityNot Available
MetabolismNot Available
Toxicity ValuesNot Available
Lethal DoseNot Available
Carcinogenicity (IARC Classification)Not Available
Uses/SourcesNot Available
Minimum Risk LevelNot Available
Health EffectsNot Available
SymptomsNot Available
TreatmentNot Available
Concentrations
Not Available
DrugBank IDNot Available
HMDB IDHMDB0000717
FooDB IDFDB022201
Phenol Explorer IDNot Available
KNApSAcK IDNot Available
BiGG IDNot Available
BioCyc IDNot Available
METLIN ID5685
PDB IDNot Available
Wikipedia LinkNot Available
Chemspider ID144522
ChEBI ID81253
PubChem Compound ID164853
Kegg Compound IDC17658
YMDB IDNot Available
ECMDB IDNot Available
References
Synthesis ReferenceNot Available
MSDSNot Available
General References
1. https://www.ncbi.nlm.nih.gov/pubmed/?term=1011939
2. https://www.ncbi.nlm.nih.gov/pubmed/?term=10214695
3. https://www.ncbi.nlm.nih.gov/pubmed/?term=18039809
4. https://www.ncbi.nlm.nih.gov/pubmed/?term=24845039
5. https://www.ncbi.nlm.nih.gov/pubmed/?term=2932163
6. https://www.ncbi.nlm.nih.gov/pubmed/?term=3120571
7. https://www.ncbi.nlm.nih.gov/pubmed/?term=3778926
8. Radominska-Pyrek, Anna; Huynh, Triet; Lester, Roger; St. Pyrek, Jan. Preparation and characterization of 3-monohydroxylated bile acids of different side chain length and configuration at C-3. Novel approach to the synthesis of 24-norlithocholic acid. Journal of Lipid Research (1986), 27(1), 102-13.
9. van Faassen A, Bol J, van Dokkum W, Pikaar NA, Ockhuizen T, Hermus RJ: Bile acids, neutral steroids, and bacteria in feces as affected by a mixed, a lacto-ovovegetarian, and a vegan diet. Am J Clin Nutr. 1987 Dec;46(6):962-7.
10. Shoemaker JD, Elliott WH: Automated screening of urine samples for carbohydrates, organic and amino acids after treatment with urease. J Chromatogr. 1991 Jan 2;562(1-2):125-38.
11. St-Pierre MV, Kullak-Ublick GA, Hagenbuch B, Meier PJ: Transport of bile acids in hepatic and non-hepatic tissues. J Exp Biol. 2001 May;204(Pt 10):1673-86.
12. Claudel T, Staels B, Kuipers F: The Farnesoid X receptor: a molecular link between bile acid and lipid and glucose metabolism. Arterioscler Thromb Vasc Biol. 2005 Oct;25(10):2020-30. Epub 2005 Jul 21.
13. Chiang JY: Bile acid regulation of hepatic physiology: III. Bile acids and nuclear receptors. Am J Physiol Gastrointest Liver Physiol. 2003 Mar;284(3):G349-56.
14. Davis RA, Miyake JH, Hui TY, Spann NJ: Regulation of cholesterol-7alpha-hydroxylase: BAREly missing a SHP. J Lipid Res. 2002 Apr;43(4):533-43.