<?xml version="1.0" encoding="UTF-8"?>
<compound>
  <id type="integer">2993</id>
  <title>T3D2951</title>
  <common-name>Neomycin</common-name>
  <description>A component of neomycin that is produced by Streptomyces fradiae. On hydrolysis it yields neamine and neobiosamine B. (From Merck Index, 11th ed). Neomycin is a bactericidal aminoglycoside antibiotic that binds to the 30S ribosome of susceptible organisms. Binding interferes with mRNA binding and acceptor tRNA sites and results in the production of non-functional or toxic peptides. </description>
  <cas>1404-04-2</cas>
  <pubchem-id>8378</pubchem-id>
  <chemical-formula>C23H46N6O13</chemical-formula>
  <weight>614.312290</weight>
  <appearance>White powder.</appearance>
  <melting-point></melting-point>
  <boiling-point nil="true"/>
  <density nil="true"/>
  <solubility>6.47e+01 g/L</solubility>
  <specific-gravity nil="true"/>
  <flash-point nil="true"/>
  <vapour-pressure nil="true"/>
  <route-of-exposure>Eye contact; topical (eye drops). Poorly absorbed from the normal gastrointestinal tract. Although only approximately 3% of neomycin is absorbed through intact intestinal mucosa, significant amounts may be absorbed through ulcerated or denuded mucosa or if inflammation is present.</route-of-exposure>
  <target nil="true"/>
  <mechanism-of-toxicity>Aminoglycosides like neomycin "irreversibly" bind to specific 30S-subunit proteins and 16S rRNA. Specifically neomycin binds to four nucleotides of 16S rRNA and a single amino acid of protein S12. This interferes with decoding site in the vicinity of nucleotide 1400 in 16S rRNA of 30S subunit. This region interacts with the wobble base in the anticodon of tRNA. This leads to interference with the initiation complex, misreading of mRNA so incorrect amino acids are inserted into the polypeptide leading to nonfunctional or toxic peptides and the breakup of polysomes into nonfunctional monosomes.</mechanism-of-toxicity>
  <metabolism>Neomycin undergoes negligible biotransformation after parenteral administration.Route of Elimination: The small absorbed fraction is rapidly distributed in the tissues and is excreted by the kidney in keeping with the degree of kidney function.Half Life: 2 to 3 hours</metabolism>
  <toxicity>LD50: 200 mg/kg (Rat) (A308)</toxicity>
  <lethaldose nil="true"/>
  <carcinogenicity>No indication of carcinogenicity to humans (not listed by IARC).</carcinogenicity>
  <use-source>Topical uses include treatment for superficial eye infections caused by susceptible bacteria (used in combination with other antiinfectives), treatment of otitis externa caused by susceptible bacteria, treatment or prevention of bacterial infections in skin lesions, and use as a continuous short-term irrigant or rinse to prevent bacteriuria and gram negative rod bacteremia in abacteriuric patients with indwelling catheters. May be used orally to treat hepatic encephalopathy, as a perioperative prophylactic agent, and as an adjunct to fluid and electrolyte replacement in the treatment of diarrhea caused to enteropathogenic E. coli (EPEC). </use-source>
  <min-risk-level nil="true"/>
  <health-effects>Antibiotic resistance</health-effects>
  <symptoms>Vestibular toxicity may result in vertigo, nausea and vomiting, dizziness and loss of balance. </symptoms>
  <treatment>Hemodialysis will remove neomycin sulfate from the blood. (L1712)</treatment>
  <created-at type="dateTime">2009-07-21T20:28:07Z</created-at>
  <updated-at type="dateTime">2026-03-31T18:20:43Z</updated-at>
  <interacting-proteins nil="true"/>
  <wikipedia>Neomycin</wikipedia>
  <uniprot-id></uniprot-id>
  <kegg-compound-id>C00384</kegg-compound-id>
  <omim-id></omim-id>
  <chebi-id>7507</chebi-id>
  <biocyc-id></biocyc-id>
  <ctd-id nil="true"/>
  <stitch-id>Neomycin</stitch-id>
  <drugbank-id>DB00994</drugbank-id>
  <pdb-id>NMY</pdb-id>
  <actor-id nil="true"/>
  <organism nil="true"/>
  <export type="boolean">true</export>
  <metabolizing-proteins nil="true"/>
  <transporting-proteins nil="true"/>
  <moldb-smiles>NC[C@@H]1O[C@H](O[C@@H]2[C@@H](CO)O[C@@H](O[C@@H]3[C@@H](O)[C@H](N)C[C@H](N)[C@H]3O[C@H]3O[C@H](CN)[C@@H](O)[C@H](O)[C@H]3N)[C@@H]2O)[C@H](N)[C@@H](O)[C@@H]1O</moldb-smiles>
  <moldb-formula>C23H46N6O13</moldb-formula>
  <moldb-inchi>InChI=1S/C23H46N6O13/c24-2-7-13(32)15(34)10(28)21(37-7)40-18-6(27)1-5(26)12(31)20(18)42-23-17(36)19(9(4-30)39-23)41-22-11(29)16(35)14(33)8(3-25)38-22/h5-23,30-36H,1-4,24-29H2/t5-,6+,7-,8+,9-,10-,11-,12+,13-,14-,15-,16-,17-,18-,19-,20-,21-,22-,23+/m1/s1</moldb-inchi>
  <moldb-inchikey>PGBHMTALBVVCIT-VCIWKGPPSA-N</moldb-inchikey>
  <moldb-average-mass type="decimal">614.6437</moldb-average-mass>
  <moldb-mono-mass type="decimal">614.312285588</moldb-mono-mass>
  <origin>Exogenous</origin>
  <state>Solid</state>
  <logp>-7.8</logp>
  <hmdb-id>HMDB15129</hmdb-id>
  <chembl-id>CHEMBL449118</chembl-id>
  <chemspider-id>8075</chemspider-id>
  <structure-image-file-name nil="true"/>
  <structure-image-content-type nil="true"/>
  <structure-image-file-size type="integer" nil="true"/>
  <structure-image-updated-at type="dateTime" nil="true"/>
  <biodb-id nil="true"/>
  <synthesis-reference>&lt;p&gt;Jaehoon Yu, Jongkook Lee, Miyun Kwon, Ae Pae, Hun Koh, &amp;#8220;Heterodimeric conjugates of neomycin-oxazolidinone, their preparation and their use.&amp;#8221; U.S. Patent US20050222055, issued October 06, 2005.&lt;/p&gt;</synthesis-reference>
  <structure-image-caption nil="true"/>
  <chemdb-id>CHEM002314</chemdb-id>
  <dsstox-id>DTXSID9041073</dsstox-id>
  <toxcast-id nil="true"/>
  <stoff-ident-origin>UBA</stoff-ident-origin>
  <stoff-ident-id>SI00008662</stoff-ident-id>
  <susdat-id>NS00010003</susdat-id>
  <iupac>(2S,3S,4R,5R,6R)-5-amino-2-(aminomethyl)-6-{[(2R,3S,4R,5S)-5-{[(1R,2R,3S,5R,6S)-3,5-diamino-2-{[(2R,3R,4R,5S,6R)-3-amino-6-(aminomethyl)-4,5-dihydroxyoxan-2-yl]oxy}-6-hydroxycyclohexyl]oxy}-4-hydroxy-2-(hydroxymethyl)oxolan-3-yl]oxy}oxane-3,4-diol</iupac>
</compound>
