<?xml version="1.0" encoding="UTF-8"?>
<compound>
  <id type="integer">861</id>
  <title>T3D0859</title>
  <common-name>Linamarin</common-name>
  <description>Linamarin is found in coffee and coffee products. Linamarin occurs in manioc (Manihot utilissimus), flax (Linum usitatissimum), Phaseolus lunatus (butter bean), Trifolium repens (white clover) and other plants. First isloated in 1830.</description>
  <cas>554-35-8</cas>
  <pubchem-id>11128</pubchem-id>
  <chemical-formula>C10H17NO6</chemical-formula>
  <weight>369.075880</weight>
  <appearance>White powder.</appearance>
  <melting-point>143 - 144°C</melting-point>
  <boiling-point></boiling-point>
  <density></density>
  <solubility></solubility>
  <specific-gravity></specific-gravity>
  <flash-point></flash-point>
  <vapour-pressure></vapour-pressure>
  <route-of-exposure>Oral</route-of-exposure>
  <target nil="true"/>
  <mechanism-of-toxicity>Organic nitriles decompose into cyanide ions both in vivo and in vitro. Consequently the primary mechanism of toxicity for organic nitriles is their production of toxic cyanide ions or hydrogen cyanide. Cyanide is an inhibitor of cytochrome c oxidase in the fourth complex of the electron transport chain (found in the membrane of the mitochondria of eukaryotic cells). It complexes with the ferric iron atom in this enzyme. The binding of cyanide to this cytochrome prevents transport of electrons from cytochrome c oxidase to oxygen. As a result, the electron transport chain is disrupted and the cell can no longer aerobically produce ATP for energy. Tissues that mainly depend on aerobic respiration, such as the central nervous system and the heart, are particularly affected. Cyanide is also known produce some of its toxic effects by binding to catalase, glutathione peroxidase, methemoglobin, hydroxocobalamin, phosphatase, tyrosinase, ascorbic acid oxidase, xanthine oxidase, succinic dehydrogenase, and Cu/Zn superoxide dismutase. Cyanide binds to the ferric ion of methemoglobin to form inactive cyanmethemoglobin. (L97)</mechanism-of-toxicity>
  <metabolism>Upon exposure to enzymes and gut flora in the human intestine, linamarin can decompose to the toxic chemical hydrogen cyanide. This occurs via the enzyme linamarase, which is found in the cell wall of the plant. Chewing of the plant allows the enzyme to contact the linamarin,  converting it into acetone cyanohydrin, which then spontaneously decomposes to hydrogen cyanide. Ingested and absorbed linamarin is rapidly excreted in the urine and the glucoside itself does not appear to be acutely toxic. (L630) Organic nitriles are converted into cyanide ions through the action of cytochrome P450 enzymes in the liver. Cyanide is rapidly absorbed and distributed throughout the body. Cyanide is mainly metabolized into thiocyanate by either rhodanese or 3-mercaptopyruvate sulfur transferase. Cyanide metabolites are excreted in the urine. (L96)</metabolism>
  <toxicity></toxicity>
  <lethaldose></lethaldose>
  <carcinogenicity>No indication of carcinogenicity to humans (not listed by IARC).</carcinogenicity>
  <use-source>Linamarin is a cyanogenic glucoside found in the leaves and roots of plants such as cassava, lima beans, and flax. (L630)</use-source>
  <min-risk-level></min-risk-level>
  <health-effects>Ingestion of food prepared from insufficiently processed cassava roots with high linamarin levels has been associated with dietary toxicity, particularly with the upper motor neuron disease known as konzo to the African populations. Dietary exposure to linamarin has also been reported as a risk factor in developing glucose intolerance and diabetes. (L630)</health-effects>
  <symptoms>Cyanide poisoning is identified by rapid, deep breathing and shortness of breath, general weakness, giddiness, headaches, vertigo, confusion, convulsions/seizures and eventually loss of consciousness. (L96, L97)
</symptoms>
  <treatment></treatment>
  <created-at type="dateTime">2009-06-10T17:21:19Z</created-at>
  <updated-at type="dateTime">2026-04-06T02:22:41Z</updated-at>
  <interacting-proteins>Cyanogenic beta-glucosidase (P26205)
(L630)
</interacting-proteins>
  <wikipedia>http://en.wikipedia.org/wiki/Linamarin</wikipedia>
  <uniprot-id></uniprot-id>
  <kegg-compound-id>C01594</kegg-compound-id>
  <omim-id></omim-id>
  <chebi-id>16441</chebi-id>
  <biocyc-id></biocyc-id>
  <ctd-id>C005091</ctd-id>
  <stitch-id>Linamarin</stitch-id>
  <drugbank-id></drugbank-id>
  <pdb-id></pdb-id>
  <actor-id></actor-id>
  <organism nil="true"/>
  <export type="boolean">true</export>
  <metabolizing-proteins>Cyanogenic beta-glucosidase (P26205)
(L630)</metabolizing-proteins>
  <transporting-proteins nil="true"/>
  <moldb-smiles>[H][C@]1(O)[C@]([H])(O)[C@@]([H])(CO)O[C@@]([H])(OC(C)(C)C#N)[C@]1([H])O</moldb-smiles>
  <moldb-formula>C10H17NO6</moldb-formula>
  <moldb-inchi>InChI=1S/C10H17NO6/c1-10(2,4-11)17-9-8(15)7(14)6(13)5(3-12)16-9/h5-9,12-15H,3H2,1-2H3/t5-,6-,7+,8-,9+/m1/s1</moldb-inchi>
  <moldb-inchikey>QLTCHMYAEJEXBT-ZEBDFXRSSA-N</moldb-inchikey>
  <moldb-average-mass type="decimal">247.2451</moldb-average-mass>
  <moldb-mono-mass type="decimal">247.105587281</moldb-mono-mass>
  <origin>Exogenous</origin>
  <state>Solid</state>
  <logp></logp>
  <hmdb-id>HMDB33699</hmdb-id>
  <chembl-id>CHEMBL3039425</chembl-id>
  <chemspider-id>10657</chemspider-id>
  <structure-image-file-name nil="true"/>
  <structure-image-content-type nil="true"/>
  <structure-image-file-size type="integer" nil="true"/>
  <structure-image-updated-at type="dateTime" nil="true"/>
  <biodb-id nil="true"/>
  <synthesis-reference nil="true"/>
  <structure-image-caption nil="true"/>
  <chemdb-id>CHEM000742</chemdb-id>
  <dsstox-id>DTXSID8052857</dsstox-id>
  <toxcast-id nil="true"/>
  <stoff-ident-origin nil="true"/>
  <stoff-ident-id nil="true"/>
  <susdat-id>NS00094824</susdat-id>
  <iupac>2-methyl-2-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}propanenitrile</iupac>
</compound>
